How to install OOD-FISH

• Clone the git repository locally.

git clone https://github.com/ggirelli/ood-fish/
cd ood-fish

• Install R dependencies by running the following in an R command line.

for ( p in c("argparser", "data.table", "parallel", "readr") )
    if ( !require(p, character.only = T) )
        install.packages(p)

• Compile if needed.

gcc src/dfeCalc.c -o src/dfeCalc

• Install PMC algorithm following the instructions here.